Commit 063d1572 authored by Roman Flury's avatar Roman Flury

spam goes pkgdown

parent 436d4ef5
## General and platform dependent
SHELL := /bin/bash
LIBPATH = #export R_LIBS_USER=$(shell pwd)/lib:/usr/sepp1.5.1/drwho/pack-a/r-3.2.1-ro/amd64-linux-ubuntu14.04/lib/R/library:/home/furrer/R/x86_64-pc-linux-gnu-library/3.5 &&
#R := $(LIBPATH) R
#RSCRIPT := $(LIBPATH) Rscript
#LIBPATH = export R_LIBS_USER=$(shell pwd)/lib:/usr/sepp1.5.1/drwho/pack-a/r-devel-99-ro/amd64-linux-ubuntu14.04/lib/R/library:/home/furrer/R/x86_64-pc-linux-gnu-library/3.5:/usr/lib/R-devel/lib/R/library &&
R := $(LIBPATH) R-99 ## On I-MATH servers: daily built devel version
RSCRIPT := $(LIBPATH) Rscript-99 ## On I-MATH servers: daily built devel version
.SUFFIXES: .Rnw .R .Rout .tex .pdf .c .o .so .f
No preview for this file type
^.*\.Rproj$
^\.Rproj\.user$
^\_pkgdown\.yaml$
^README\.Rmd$
Makefile
docs/
Package: spam
Type: Package
Title: SPArse Matrix
Version: 2.2-0
Date: 2018-06-19
Version: 2.2-1
Date: 2018-08-03
Authors@R: c(person("Reinhard", "Furrer", role = c("aut", "cre"),
email = "reinhard.furrer@math.uzh.ch"),
person("Florian", "Gerber", role = c("ctb"),
......@@ -43,8 +43,11 @@ Suggests:
Matrix,
testthat,
R.rsp,
truncdist
VignetteBuilder: R.rsp
truncdist,
knitr,
rmarkdown
VignetteBuilder: R.rsp,
knitr
Description: Set of functions for sparse matrix algebra.
Differences with other sparse matrix packages are:
(1) we only support (essentially) one sparse matrix format,
......@@ -54,3 +57,4 @@ Description: Set of functions for sparse matrix algebra.
LazyData: true
License: LGPL-2 | BSD_3_clause + file LICENSE
URL: https://git.math.uzh.ch/reinhard.furrer/spam
RoxygenNote: 6.0.1
# Makefile to build the pkgdown website of spam
# can be used for spam-devel and spam
include ../Makefile.defs
all: pkgdown
pkgdown:
$(RSCRIPT) -e "pkgdown::build_site()"
clean:
rm -rf docs/
This diff is collapsed.
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
This diff is collapsed.
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
rep_len64 <- function(x, length.out, NAOK = getOption("spam.NAOK")){
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
var.spam <- function(x, ...) {
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
This diff is collapsed.
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
......@@ -5,16 +5,8 @@
# --> https://CRAN.R-project.org/package=spam64 #
# --> https://git.math.uzh.ch/reinhard.furrer/spam #
# by Reinhard Furrer [aut, cre], Florian Gerber [ctb], #
# Daniel Gerber [ctb], Kaspar Moesinger [ctb], #
# Youcef Saad [ctb] (SPARSEKIT), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines), #
# Esmond G. Ng [ctb] (Fortran Cholesky routines), #
# Barry W. Peyton [ctb] (Fortran Cholesky routines), #
# Joseph W.H. Liu [ctb] (Fortran Cholesky routines), #
# Alan D. George [ctb] (Fortran Cholesky routines) #
# Roman Flury [ctb], Daniel Gerber [ctb], #
# Kaspar Moesinger [ctb] #
# HEADER END ################################################
......
---
title: "`spam`"
output:
rmarkdown::html_document:
fig_caption: yes
number_sections: true
toc: true
toc_depth: 2
citation_package: natbib
header-includes:
- \usepackage{bm}
- \usepackage{setspace}\onehalfspacing
- \usepackage[labelfont=bf]{caption}
- \usepackage{hyperref}
- \setcitestyle{round}
vignette: >
\usepackage[utf8]{inputenc}
%\VignetteEngine{knitr::rmarkdown}
%\VignetteIndexEntry{`spam`}
%\VignetteEncoding{UTF-8}
---
[![](https://www.r-pkg.org/badges/version-ago/spam)](https://cran.r-project.org/package=spam)
[![](https://cranlogs.r-pkg.org/badges/spam)](https://cran.r-project.org/package=spam)
A set of functions for sparse matrix algebra.
Differences with other sparse matrix packages are:
* we only support (essentially) one sparse matrix format,
* based on transparent and simple structure(s),
* tailored for MCMC calculations within G(M)RF.
* and it is fast and scalable (with the extension package spam64).
```{r setup, include = FALSE}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>",
fig.width = 7, fig.height = 7,
fig.align = "center"
)
library(spam)
```
```{r sparsematrix, echo=FALSE, warning=FALSE, fig.cap = '\\label{fig:sparsematrix}'}
path <- system.file("demodata/germany.adjacency", package="spam")
W <- spam::adjacency.landkreis(path)
par(pty='s')
spam::display.spam(W, cex = 2)
```
title: spam
url:
template:
params:
bootswatch: yeti
reference:
- title: Data
desc: ~
contents:
- '`adjacency`'
- '`germany`'
- '`germany.plot`'
- '`map.landkreis`'
- '`Oral`'
- '`UScounties`'
- '`USprecip`'
- title: Classes
desc: ~
contents:
- '`spam-class`'
- '`spam.chol.NgPeyton-class`'