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<h1>License</h1>
</div>
<pre>YEAR: 1996-2008
COPYRIGHT HOLDER: D.C. Sorensen, R.B. Lehoucq, C. Yang, and K. Maschhoff
ORGANIZATION: Rice University
</pre>
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<h1>Citation</h1>
</div>
<p>Furrer R, Sain SR (2010).
&ldquo;spam: A Sparse Matrix R Package with Emphasis on MCMC Methods for Gaussian Markov Random Fields.&rdquo;
<em>Journal of Statistical Software</em>, <b>36</b>(10), 1&ndash;25.
<a href="http://www.jstatsoft.org/v36/i10/">http://www.jstatsoft.org/v36/i10/</a>.
</p>
<pre>@Article{,
title = {{spam}: A Sparse Matrix {R} Package with Emphasis on {MCMC} Methods for {G}aussian {M}arkov Random Fields},
author = {Reinhard Furrer and Stephan R. Sain},
journal = {Journal of Statistical Software},
year = {2010},
volume = {36},
number = {10},
pages = {1--25},
url = {http://www.jstatsoft.org/v36/i10/},
}</pre>
<p>Gerber F, Furrer R (2015).
&ldquo;Pitfalls in the Implementation of Bayesian Hierarchical Modeling of Areal Count Data: An Illustration Using BYM and Leroux Models.&rdquo;
<em>Journal of Statistical Software, Code Snippets</em>, <b>63</b>(1), 1&ndash;32.
<a href="http://www.jstatsoft.org/v63/c01/">http://www.jstatsoft.org/v63/c01/</a>.
</p>
<pre>@Article{,
title = {Pitfalls in the Implementation of {B}ayesian Hierarchical Modeling of Areal Count Data: An Illustration Using {BYM} and {L}eroux Models},
author = {Florian Gerber and Reinhard Furrer},
journal = {Journal of Statistical Software, Code Snippets},
year = {2015},
volume = {63},
number = {1},
pages = {1--32},
url = {http://www.jstatsoft.org/v63/c01/},
}</pre>
<p>Gerber F, Moesinger K, Furrer R (2017).
&ldquo;Extending R packages to support 64-bit compiled code: An illustration with spam64 and GIMMS NDVI3g data.&rdquo;
<em>Computer &amp; Geoscience</em>, <b>104</b>, 109&ndash;119.
ISSN 0098-3004, doi: <a href="https://doi.org/10.1016/j.cageo.2016.11.015">10.1016/j.cageo.2016.11.015</a>.
</p>
<pre>@Article{,
title = {Extending {R} packages to support 64-bit compiled code: An illustration with spam64 and {GIMMS} {NDVI3g} data},
author = {Florian Gerber and Kaspar Moesinger and Reinhard Furrer},
journal = {Computer & Geoscience},
year = {2017},
volume = {104},
pages = {109--119},
issn = {0098-3004},
doi = {10.1016/j.cageo.2016.11.015},
}</pre>
<div class="page-header">
<h1>Authors</h1>
</div>
<ul class="list-unstyled">
<li>
<p><strong>Reinhard Furrer</strong>. Author, maintainer.
</p>
</li>
<li>
<p><strong>Florian Gerber</strong>. Contributor.
</p>
</li>
<li>
<p><strong>Roman Flury</strong>. Contributor.
</p>
</li>
<li>
<p><strong>Daniel Gerber</strong>. Contributor.
</p>
</li>
<li>
<p><strong>Kaspar Moesinger</strong>. Contributor.
</p>
</li>
<li>
<p><strong>Youcef Saad</strong>. Contributor.
<br /><small>SPARSEKIT http://www-users.cs.umn.edu/~saad/software/SPARSKIT/</small></p>
</li>
<li>
<p><strong>Esmond G. Ng</strong>. Contributor.
<br /><small>Fortran Cholesky routines</small></p>
</li>
<li>
<p><strong>Barry W. Peyton</strong>. Contributor.
<br /><small>Fortran Cholesky routines</small></p>
</li>
<li>
<p><strong>Joseph W.H. Liu</strong>. Contributor.
<br /><small>Fortran Cholesky routines</small></p>
</li>
<li>
<p><strong>Alan D. George</strong>. Contributor.
<br /><small>Fortran Cholesky routines</small></p>
</li>
<li>
<p><strong>Lehoucq B. Rich</strong>. Contributor.
<br /><small>ARPACK</small></p>
</li>
<li>
<p><strong>Maschhoff Kristi</strong>. Contributor.
<br /><small>ARPACK</small></p>
</li>
<li>
<p><strong>Sorensen C. Danny</strong>. Contributor.
<br /><small>ARPACK</small></p>
</li>
<li>
<p><strong>Yang Chao</strong>. Contributor.
<br /><small>ARPACK</small></p>
</li>
</ul>
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fill='%23182359'/><path d='M5.027 11.025c0 .698-.252 1.246-.757 1.644-.505.397-1.201.596-2.089.596-.888 0-1.615-.138-2.181-.414v-1.214c.358.168.739.301 1.141.397.403.097.778.145 1.125.145.508 0 .884-.097 1.125-.29a.945.945 0 0 0 .363-.779.978.978 0 0 0-.333-.747c-.222-.204-.68-.446-1.375-.725-.716-.29-1.221-.621-1.515-.994-.294-.372-.44-.82-.44-1.343 0-.655.233-1.171.698-1.547.466-.376 1.09-.564 1.875-.564.752 0 1.5.165 2.245.494l-.408 1.047c-.698-.294-1.321-.44-1.869-.44-.415 0-.73.09-.945.271a.89.89 0 0 0-.322.717c0 .204.043.379.129.524.086.145.227.282.424.411.197.129.551.299 1.063.51.577.24.999.464 1.268.671.269.208.466.442.591.704.125.261.188.569.188.924l-.001.002zm3.98 2.24c-.924 0-1.646-.269-2.167-.808-.521-.539-.782-1.281-.782-2.226 0-.97.242-1.733.725-2.288.483-.555 1.148-.833 1.993-.833.784 0 1.404.238 1.858.714.455.476.682 1.132.682 1.966v.682H7.357c.018.577.174 1.02.467 1.329.294.31.707.465 1.241.465.351 0 .678-.033.98-.099a5.1 5.1 0 0 0 .975-.33v1.026a3.865 3.865 0 0 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background-repeat: no-repeat;
background-position: 50%;
background-size: 100%;
overflow: hidden;
text-indent: -9000px;
width: 100%;
height: 100%;
display: block;
transform: translate(-8px);
}
.algolia-autocomplete .algolia-docsearch-suggestion--highlight {
color: #FF8C00;
background: rgba(232, 189, 54, 0.1)
}
.algolia-autocomplete .algolia-docsearch-suggestion--text .algolia-docsearch-suggestion--highlight {
box-shadow: inset 0 -2px 0 0 rgba(105, 105, 105, .5)
}
.algolia-autocomplete .ds-suggestion.ds-cursor .algolia-docsearch-suggestion--content {
background-color: rgba(192, 192, 192, .15)
}
public/docs/docsearch.js 0 → 100644
View file @ e66b9e2e
$(function() {
// register a handler to move the focus to the search bar
// upon pressing shift + "/" (i.e. "?")
$(document).on('keydown', function(e) {
if (e.shiftKey && e.keyCode == 191) {
e.preventDefault();
$("#search-input").focus();
}
});
$(document).ready(function() {
// do keyword highlighting
/* modified from https://jsfiddle.net/julmot/bL6bb5oo/ */
var mark = function() {
var referrer = document.URL ;
var paramKey = "q" ;
if (referrer.indexOf("?") !== -1) {
var qs = referrer.substr(referrer.indexOf('?') + 1);
var qs_noanchor = qs.split('#')[0];
var qsa = qs_noanchor.split('&');
var keyword = "";
for (var i = 0; i < qsa.length; i++) {
var currentParam = qsa[i].split('=');
if (currentParam.length !== 2) {
continue;
}
if (currentParam[0] == paramKey) {
keyword = decodeURIComponent(currentParam[1].replace(/\+/g, "%20"));
}
}
if (keyword !== "") {
$(".contents").unmark({
done: function() {
$(".contents").mark(keyword);
}
});
}
}
};
mark();
});
});
/* Search term highlighting ------------------------------*/
function matchedWords(hit) {
var words = [];
var hierarchy = hit._highlightResult.hierarchy;
// loop to fetch from lvl0, lvl1, etc.
for (var idx in hierarchy) {
words = words.concat(hierarchy[idx].matchedWords);
}
var content = hit._highlightResult.content;
if (content) {
words = words.concat(content.matchedWords);
}
// return unique words
var words_uniq = [...new Set(words)];
return words_uniq;
}
function updateHitURL(hit) {
var words = matchedWords(hit);
var url = "";
if (hit.anchor) {
url = hit.url_without_anchor + '?q=' + escape(words.join(" ")) + '#' + hit.anchor;
} else {
url = hit.url + '?q=' + escape(words.join(" "));
}
return url;
}
public/docs/index.html 0 → 100644
View file @ e66b9e2e
<!DOCTYPE html>
<!-- Generated by pkgdown: do not edit by hand --><html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<meta charset="utf-8">
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>SPArse Matrix • spam</title>
<!-- jquery --><script src="https://code.jquery.com/jquery-3.1.0.min.js" integrity="sha384-nrOSfDHtoPMzJHjVTdCopGqIqeYETSXhZDFyniQ8ZHcVy08QesyHcnOUpMpqnmWq" crossorigin="anonymous"></script><!-- Bootstrap --><link href="https://maxcdn.bootstrapcdn.com/bootswatch/3.3.7/yeti/bootstrap.min.css" rel="stylesheet" crossorigin="anonymous">
<script src="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/js/bootstrap.min.js" integrity="sha384-Tc5IQib027qvyjSMfHjOMaLkfuWVxZxUPnCJA7l2mCWNIpG9mGCD8wGNIcPD7Txa" crossorigin="anonymous"></script><!-- Font Awesome icons --><link href="https://maxcdn.bootstrapcdn.com/font-awesome/4.6.3/css/font-awesome.min.css" rel="stylesheet" integrity="sha384-T8Gy5hrqNKT+hzMclPo118YTQO6cYprQmhrYwIiQ/3axmI1hQomh7Ud2hPOy8SP1" crossorigin="anonymous">
<!-- clipboard.js --><script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/1.7.1/clipboard.min.js" integrity="sha384-cV+rhyOuRHc9Ub/91rihWcGmMmCXDeksTtCihMupQHSsi8GIIRDG0ThDc3HGQFJ3" crossorigin="anonymous"></script><!-- sticky kit --><script src="https://cdnjs.cloudflare.com/ajax/libs/sticky-kit/1.1.3/sticky-kit.min.js" integrity="sha256-c4Rlo1ZozqTPE2RLuvbusY3+SU1pQaJC0TjuhygMipw=" crossorigin="anonymous"></script><!-- pkgdown --><link href="pkgdown.css" rel="stylesheet">